Open Biomedical Network Benchmark A Python Toolkit for Benchmarking Datasets with Biomedical Networks
Submitted to MLCB’23
Renming Liu, Arjun Krishnan
Paper / Software / Benchmark
Note: * indicates co-first authorships
Submitted to MLCB’23
Renming Liu, Arjun Krishnan
Paper / Software / Benchmark
Submitted to LoG’23
Renming Liu*, Hao Yuan*, Kayla A Johnson, Arjun Krishnan
Paper / GitHub
Submitted to ICLR’24
Wenzhuo Tang*, Renming Liu*, Hongzhi Wen, Xinnan Dai, Jiayuan Ding, Hang Li, Wenqi Fan, Yuying Xie, Jiliang Tang
Paper / GitHub
Submitted to ICLR’24
Renming Liu*, Semih Cantürk*, Olivier Lapointe-Gagné, Vincent Létourneau, Guy Wolf, Dominique Beaini, Ladislav Rampášek
Paper / GitHub
Submitted to PLOS Computational Biology
Christopher A Mancuso, Kayla A Johnson, Renming Liu, Arjun Krishnan
Paper / GitHub
Submitted to RECOMB’24
Jiayuan Ding, Julian Venegas, Qiaolin Lu, Yixin Wang, Lidan Wu, Wei Jin, Hongzhi Wen, Renming Liu, Wenzhuo Tang, Zhaoheng Li, Wangyang Zuo, Yi Chang, Yu Leo Lei, View ORCID ProfilePatrick Danaher, Yuying Xie, Jiliang Tang
Paper
Submitted to RECOMB’24
Hongzhi Wen, Wenzhuo Tang, Wei Jin, Jiayuan Ding, Renming Liu, Feng Shi, Yuying Xie, Jiliang Tang
Paper
Submitted to ACM Transactions on Intelligent Systems and Technology
Dylan Molho*, Jiayuan Ding*, Zhaoheng Li, Hongzhi Wen, Wenzhuo Tang, Yixin Wang, Julian Venegas, Wei Jin, Renming Liu, Runze Su, Patrick Danaher, Robert Yang, Yu Leo Lei, Yuying Xie, Jiliang Tang
Paper
Submitted to Genome Biology
Jiayuan Ding*, Hongzhi Wen*, Wenzhuo Tang*, Renming Liu*, Zhaoheng Li, Julian Venegas, Runze Su, Dylan Molho, Wei Jin, Wangyang Zuo, Yixin Wang, Robert Yang, Yuying Xie, Jiliang Tang
Paper / GitHub / PyPI
Published in CIKM'23: Proceedings of the 32nd ACM International Conference on Information and Knowledge Management, 2023
Wenzhuo Tang*, Hongzhi Wen*, Renming Liu*, Jiayuan Ding, Wei Jin, Yuying Xie, Hui Liu, Jiliang Tang
Paper / GitHub
Published in Bioinformatics, 2023
Christopher A Mancuso*, Renming Liu*, Arjun Krishnan
Paper / GitHub / PyPI
Published in Bioinformatics, 2023
Renming Liu, Matthew Hirn, Arjun Krishnan
Paper / Software / Benchmark
Published in LoG'22: Learning on Graphs Conference, 2022
Renming Liu*, Semih Cantürk*, Frederik Wenkel, Sarah McGuire, Xinyi Wang, Anna Little, Leslie O’Bray, Michael Perlmutter, Bastian Rieck, Matthew Hirn, Guy Wolf, Ladislav Rampášek
Paper / GitHub
Published in Industrial & Engineering Chemistry Research, 2022
Aseel M Bala, Renming Liu, Lars Peereboom, Carl T Lira
Paper
Published in Nucleic Acids Research, 2022
Christopher A Mancuso, Patrick S Bills, Douglas Krum, Jacob Newsted, Renming Liu, Arjun Krishnan
Paper / GitHub / WebServer
Published in Bioinformatics, 2021
Published in Bioinformatics, 2020
Renming Liu*, Christopher A Mancuso*, Anna Yannakopoulos, Kayla A Johnson, Arjun Krishnan
Paper / GitHub